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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
126
candidate regulatory elements
120
accessible chromatin
107
target gene predictions
85
gene expression
79
chromatin state
49
binding sites
32
differential activity
histone modifications
29
variant allelic effects
27
eQTL
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
188
September, 2022
123
February, 2021
56
November, 2021
52
September, 2023
35
February, 2024
25
June, 2020
23
January, 2020
23
May, 2020
21
March, 2020
19
May, 2021
14
February, 2020
14
October, 2022
12
August, 2021
11
March, 2023
9
January, 2022
8
August, 2017
7
November, 2022
6
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
444
bed bed3+
129
tsv
83
bigWig
71
bed bed9
10
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
675
Homo sapiens
Biosample type
419
primary cell
177
tissue
48
in vitro differentiated cells
30
cell line
1
stem cell
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
271
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
555
AMP
56
ENCODE
50
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
541
hg19
202
GRCh38
2
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
675 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of lung
6
4
4
2
+ See 72 more…
tissue
adipose tissue
7
2
8
3
6
1
1
4
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
1
1
6
3
tibial artery
3
3
2
1
3
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 14 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
mesenchymal stem cell
3
1
3
2
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
2
1
foreskin fibroblast
1
1
1
smooth muscle cell of the coronary artery
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
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