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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
61
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
46
March, 2023
44
September, 2022
33
May, 2021
30
February, 2021
24
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
June, 2020
3
August, 2017
2
November, 2019
1
April, 2019
1
August, 2021
1
February, 2020
1
February, 2023
1
January, 2018
1
June, 2021
Available data
154
bed bed3+
75
tsv
57
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
258
Homo sapiens
Biosample type
125
primary cell
96
tissue
34
cell line
3
in vitro differentiated cells
Organ
921
epithelium
633
kidney
419
connective tissue
416
brain
362
musculature of body
304
lung
276
intestine
258
pancreas
254
vasculature
244
heart
233
limb
205
embryo
204
bodily fluid
194
blood vessel
193
blood
193
skin of body
165
large intestine
143
liver
139
extraembryonic component
115
stomach
102
eye
84
bone element
83
mammary gland
82
small intestine
80
uterus
75
adipose tissue
72
prostate gland
71
adrenal gland
70
placenta
67
artery
63
ureter
61
penis
54
lymph node
48
thymus
43
gonad
40
esophagus
39
spinal cord
32
spleen
22
lymphoid tissue
22
nerve
22
testis
22
vein
21
ovary
21
thyroid gland
20
lymphatic vessel
18
skeleton
17
mouth
15
bronchus
13
bone marrow
12
pituitary gland
11
breast
9
tongue
9
urinary bladder
9
vagina
4
trachea
3
nose
1
pericardium
Project
218
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
172
hg19
56
GRCh38
annotation_type!
meQTL
eQTL
month_released!
June, 2020
BIOSAMPLE
TYPE
258 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic beta cell
8
3
3
3
1
pancreatic ductal cell
5
3
3
3
1
2
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
5
11
1
3
1
1
2
2
2
2
body of pancreas
2
5
8
4
1
3
pancreas
3
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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