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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
target gene predictions
37
candidate regulatory elements
19
chromatin state
16
binding sites
10
accessible chromatin
7
histone modifications
2
gene expression
eQTL
1
variant allelic effects
Date released
54
September, 2022
52
February, 2024
38
February, 2021
8
November, 2021
6
June, 2020
4
May, 2021
4
October, 2022
2
March, 2024
1
August, 2017
Available data
149
bed bed3+
18
bed bed9
4
bigWig
2
tsv
Organism
169
Homo sapiens
Biosample type
101
cell line
51
primary cell
14
tissue
3
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
262
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
161
AMP
8
ENCODE
Genome assembly (visualization)
167
hg19
77
GRCh38
annotation_type!
meQTL
eQTL
BIOSAMPLE
TYPE
169 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
variant allelic effects
cell line
HeLa-S3
55
5
3
1
MCF-7
6
9
5
3
1
2
T47D
2
3
2
MCF 10A
3
Ishikawa
1
primary cell
mammary gland epithelial cell
4
3
3
1
1
1
mammary epithelial cell
1
3
1
4
1
fibroblast of mammary gland
1
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
luminal epithelial cell of mammary gland
3
1
1
2
+ See 2 more…
tissue
uterus
2
3
1
1
1
endometrium cancer
1
1
mammary gland
1
1
cervix - ectocervix
1
endometrium
1
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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