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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
913
accessible chromatin
817
binding sites
683
gene expression
eQTL
167
differential activity
140
variant allelic effects
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2587
February, 2021
1678
September, 2022
378
May, 2021
371
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
128
March, 2020
101
August, 2021
101
October, 2022
83
January, 2020
69
March, 2023
56
January, 2021
49
May, 2022
44
November, 2022
38
February, 2020
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5911
bed bed3+
873
tsv
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6861
Homo sapiens
Biosample type
2258
primary cell
2163
cell line
2051
tissue
430
in vitro differentiated cells
4
stem cell
Organ
896
epithelium
571
kidney
398
connective tissue
371
brain
297
musculature of body
249
pancreas
240
lung
231
intestine
228
vasculature
203
heart
191
bodily fluid
189
limb
188
embryo
182
blood
171
blood vessel
167
skin of body
139
large intestine
134
liver
112
extraembryonic component
99
eye
95
stomach
78
uterus
75
bone element
73
mammary gland
68
adipose tissue
64
prostate gland
64
small intestine
62
artery
58
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
39
gonad
38
thymus
35
esophagus
33
spinal cord
27
spleen
20
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
19
vein
18
ovary
18
thyroid gland
15
skeleton
14
bronchus
14
mouth
12
bone marrow
12
pituitary gland
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
6204
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
2
ITG
Genome assembly (visualization)
6029
hg19
881
GRCh38
1
hg18
annotation_type!
meQTL
eQTL
files.file_type!
bed bed9
BIOSAMPLE
TYPE
6908 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
2
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
2
2
B cell
14
10
6
2
+ See 443 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 764 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
7
1
brain
29
16
3
2
1
1
1
lung
33
17
1
+ See 251 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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