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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
944
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1569
February, 2021
289
June, 2020
222
November, 2021
140
May, 2021
91
October, 2022
65
January, 2020
55
February, 2024
54
May, 2020
48
August, 2021
44
November, 2022
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
12
September, 2022
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2020
Available data
2696
bed bed3+
528
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2662
Homo sapiens
Biosample type
1390
cell line
794
primary cell
322
tissue
201
in vitro differentiated cells
Organ
283
epithelium
144
connective tissue
106
brain
83
bodily fluid
81
blood
76
pancreas
69
eye
65
vasculature
63
kidney
51
liver
48
blood vessel
44
skin of body
41
musculature of body
37
heart
36
embryo
35
intestine
29
bone element
28
lung
24
limb
24
lymph node
24
mammary gland
22
artery
21
large intestine
20
prostate gland
17
extraembryonic component
15
penis
10
adipose tissue
10
placenta
9
gonad
9
stomach
9
uterus
8
skeleton
7
adrenal gland
7
lymphatic vessel
6
bone marrow
6
bronchus
6
testis
6
vein
5
trachea
4
esophagus
4
spinal cord
4
thymus
4
ureter
3
lymphoid tissue
3
nerve
3
small intestine
3
spleen
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
2437
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
2697
hg19
503
GRCh38
1
hg18
annotation_type!
other
BIOSAMPLE
TYPE
2707 results
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Clear Filters
histone modifications
accessible chromatin
binding sites
cell line
breast cancer cell
11
9
neuroblastoma cell
8
4
gastric cancer cell
9
2
EndoC_BH1
1
8
1
HepG2
5
2
3
+ See 667 more…
primary cell
monocyte
86
18
1
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
2
fibroblast
16
1
hepatocyte
4
8
1
+ See 269 more…
tissue
retina
1
23
1
pigmented layer of retina
20
kidney
2
10
1
islet of Langerhans
1
6
2
heart
1
5
1
+ See 160 more…
in vitro differentiated cells
neural progenitor cell
15
10
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
6
1
neuroblastoma cell line
6
2
adipocyte
1
4
1
+ See 76 more…
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