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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
target gene predictions
126
candidate regulatory elements
86
accessible chromatin
75
chromatin state
53
binding sites
49
gene expression
35
histone modifications
33
differential activity
18
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
212
September, 2022
134
February, 2021
53
February, 2024
47
March, 2023
40
May, 2021
22
June, 2020
21
November, 2021
20
January, 2021
20
October, 2022
10
August, 2021
9
March, 2020
7
August, 2018
6
May, 2020
6
October, 2019
5
August, 2017
5
January, 2022
4
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
452
bed bed3+
77
tsv
69
bed bed9
60
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
630
Homo sapiens
Biosample type
232
cell line
215
tissue
175
primary cell
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
217
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
587
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
537
hg19
149
GRCh38
annotation_type!
pQTL
BIOSAMPLE
TYPE
630 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
differential activity
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
K562
23
7
1
7
2
1
EndoC_BH1
1
8
8
3
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
1
2
1
GM19240
2
1
1
1
2
1
+ See 30 more…
tissue
placenta
15
26
1
14
1
2
1
islet of Langerhans
1
6
3
2
11
1
13
1
2
2
2
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
chorionic villus
4
8
4
+ See 14 more…
primary cell
pancreatic ductal cell
3
6
1
3
2
3
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
5
7
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 24 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
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