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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
193
candidate regulatory elements
145
target gene predictions
116
accessible chromatin
108
chromatin state
83
gene expression
38
differential activity
30
eQTL
27
histone modifications
25
binding sites
22
variant allelic effects
14
Fine-mapped variants
3
caQTL
2
sQTL
2
variant to gene
Date released
294
September, 2022
149
February, 2021
69
February, 2024
51
March, 2023
42
May, 2021
34
November, 2021
28
March, 2020
20
January, 2021
19
August, 2021
15
June, 2020
14
May, 2020
12
January, 2020
10
February, 2020
9
August, 2017
7
August, 2018
7
October, 2019
6
January, 2022
5
May, 2022
4
October, 2022
3
November, 2019
2
March, 2024
2
May, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
September, 2018
Available data
541
bed bed3+
118
tsv
98
bed bed9
96
bigWig
14
bigBed narrowPeak
6
bigBed bed9
6
csv
4
bam
3
bed gappedPeak
3
xls
Organism
808
Homo sapiens
Biosample type
478
tissue
239
primary cell
79
cell line
12
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
217
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
752
AMP
34
ENCODE
20
T1D
2
community
Genome assembly (visualization)
677
hg19
217
GRCh38
2
hg18
annotation_type!
pQTL
BIOSAMPLE
TYPE
808 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
caQTL
sQTL
variant to gene
tissue
muscle of arm
33
16
1
16
1
muscle of leg
27
14
2
15
muscle of back
28
13
13
liver
13
10
4
9
1
1
7
2
1
1
islet of Langerhans
1
6
3
11
13
1
2
1
2
2
2
+ See 31 more…
primary cell
hepatocyte
1
3
8
1
13
4
1
2
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 26 more…
cell line
EndoC_BH1
1
8
8
3
1
HepG2
2
3
2
2
5
3
LHCN-M2
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
A673
2
2
1
+ See 8 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
myotube
1
1
See all biosamples
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