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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
64
accessible chromatin
35
candidate regulatory elements
20
target gene predictions
17
chromatin state
9
binding sites
5
histone modifications
eQTL
3
gene expression
2
variant allelic effects
Date released
51
September, 2022
29
February, 2021
24
February, 2023
22
November, 2022
10
June, 2020
6
November, 2021
3
October, 2022
2
January, 2020
2
March, 2024
2
May, 2020
1
February, 2020
1
February, 2024
1
March, 2020
1
May, 2021
Available data
135
bed bed3+
37
bigWig
17
bed bed9
3
tsv
Organism
155
Homo sapiens
Biosample type
106
tissue
26
primary cell
17
cell line
6
in vitro differentiated cells
Organ
946
epithelium
648
kidney
439
connective tissue
437
brain
368
musculature of body
310
lung
286
intestine
260
pancreas
260
vasculature
249
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
198
blood vessel
172
large intestine
148
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
70
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
149
AMP
6
ENCODE
Genome assembly (visualization)
152
hg19
25
GRCh38
annotation_type!
sQTL
eQTL
BIOSAMPLE
TYPE
155 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
gene expression
variant allelic effects
tissue
retina
23
6
3
3
1
1
1
1
ovary
1
8
6
4
1
pigmented layer of retina
20
testis
1
7
3
3
1
1
1
eye
1
4
2
2
+ See 1 more…
primary cell
retinal pigment epithelial cell
3
2
1
1
2
1
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
luteal cell
1
1
+ See 3 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
NT2-D1 cell
1
1
1
1
2
NT2/D1
1
fibroblast of the conjunctiva
1
retinal cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
See all biosamples
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