Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
histone modifications
903
accessible chromatin
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
sQTL
Date released
1672
September, 2022
851
February, 2021
333
November, 2021
288
June, 2020
287
February, 2024
171
May, 2021
135
May, 2020
66
January, 2020
56
January, 2021
44
March, 2020
41
November, 2022
34
August, 2017
34
August, 2021
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
10
October, 2022
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4129
bed bed3+
900
tsv
869
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4083
Homo sapiens
Biosample type
1724
tissue
1285
primary cell
898
cell line
216
in vitro differentiated cells
4
stem cell
Organ
476
epithelium
296
kidney
274
connective tissue
267
musculature of body
245
brain
226
lung
214
intestine
171
limb
162
heart
154
embryo
147
pancreas
134
skin of body
134
vasculature
126
large intestine
119
bodily fluid
112
blood
104
extraembryonic component
101
blood vessel
92
stomach
88
eye
74
liver
70
uterus
64
small intestine
57
adrenal gland
56
bone element
56
mammary gland
51
ureter
50
placenta
48
prostate gland
46
adipose tissue
42
penis
38
lymph node
36
thymus
35
artery
33
esophagus
33
gonad
27
spinal cord
25
spleen
17
lymphoid tissue
17
ovary
17
thyroid gland
15
skeleton
15
testis
14
nerve
13
mouth
13
vein
11
bronchus
11
lymphatic vessel
10
pituitary gland
9
breast
7
bone marrow
7
tongue
7
urinary bladder
6
vagina
3
nose
1
trachea
Project
3716
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4122
hg19
689
GRCh38
annotation_type!
sQTL
binding sites
histone modifications
BIOSAMPLE
TYPE
4129 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
tissue
heart
37
20
5
2
stomach
40
21
3
kidney
29
14
10
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 158 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
CD14-positive monocyte
8
19
endothelial cell
7
15
2
2
1
fibroblast
4
16
6
+ See 283 more…
cell line
HeLa-S3
5
55
A549
21
19
1
H1-hESC
1
39
1
K562
7
23
1
1
HFFc6
19
+ See 274 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
neural progenitor cell
5
5
10
adipocyte
4
6
4
4
mesenchymal stem cell
3
3
1
cardiac muscle cell
4
1
1
+ See 57 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download