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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
16
target gene predictions
15
chromatin state
12
binding sites
5
histone modifications
1
variant allelic effects
Date released
42
September, 2022
28
February, 2021
June, 2020
3
October, 2022
2
May, 2021
1
August, 2017
1
February, 2024
Available data
63
bed bed3+
14
bed bed9
Organism
77
Homo sapiens
Biosample type
38
primary cell
35
cell line
2
in vitro differentiated cells
2
tissue
Organ
797
epithelium
634
kidney
445
brain
390
connective tissue
358
musculature of body
296
lung
260
intestine
254
vasculature
253
pancreas
240
heart
238
limb
206
bodily fluid
203
embryo
197
blood vessel
195
blood
186
skin of body
161
large intestine
146
liver
137
extraembryonic component
107
stomach
99
eye
88
adipose tissue
83
bone element
79
small intestine
79
uterus
77
mammary gland
73
prostate gland
72
artery
69
placenta
63
ureter
62
adrenal gland
61
penis
54
lymph node
47
thymus
44
gonad
41
spinal cord
39
esophagus
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
vein
20
ovary
20
thyroid gland
18
mouth
18
skeleton
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
bone marrow
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
77
AMP
ENCODE
Genome assembly (visualization)
77
hg19
14
GRCh38
annotation_type!
sQTL
month_released!
June, 2020
award.project!
ENCODE
BIOSAMPLE
TYPE
77 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
primary cell
mammary gland epithelial cell
3
3
3
1
1
mammary epithelial cell
3
1
1
4
myoepithelial cell of mammary gland
4
2
2
fibroblast of mammary gland
2
1
1
2
1
luminal epithelial cell of mammary gland
1
1
1
cell line
MCF-7
9
6
5
3
2
T47D
3
2
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
tissue
mammary gland
1
1
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