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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
accessible chromatin
96
candidate regulatory elements
86
target gene predictions
56
chromatin state
50
gene expression
37
binding sites
histone modifications
22
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
144
September, 2022
96
February, 2021
54
November, 2021
29
November, 2022
25
February, 2023
25
June, 2020
19
February, 2024
17
September, 2023
16
May, 2021
14
October, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
395
bed bed3+
91
bigWig
67
tsv
49
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
535
Homo sapiens
Biosample type
289
primary cell
162
tissue
52
in vitro differentiated cells
31
cell line
1
stem cell
Organ
921
epithelium
646
kidney
435
connective tissue
418
brain
368
musculature of body
307
lung
281
intestine
269
pancreas
258
vasculature
249
heart
242
limb
204
embryo
198
blood vessel
193
bodily fluid
191
skin of body
183
blood
169
large intestine
142
liver
141
extraembryonic component
118
stomach
105
eye
88
adipose tissue
84
small intestine
83
bone element
82
mammary gland
81
uterus
73
adrenal gland
71
prostate gland
70
artery
70
placenta
64
ureter
59
penis
58
lymph node
49
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
25
nerve
25
testis
23
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
20
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
455
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
460
hg19
137
GRCh38
2
hg18
annotation_type!
sQTL
histone modifications
BIOSAMPLE
TYPE
535 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
osteoblast
5
2
2
1
2
3
foreskin fibroblast
1
6
2
1
4
+ See 49 more…
tissue
retina
23
6
3
3
1
1
1
1
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
pigmented layer of retina
20
omental fat pad
2
5
2
2
2
2
3
+ See 9 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
retinal pigment epithelial cell
6
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
WERI-Rb-1
1
2
1
1
2
GM23248
1
2
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
2
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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