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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
251
accessible chromatin
207
candidate regulatory elements
196
target gene predictions
123
chromatin state
92
differential activity
75
histone modifications
57
binding sites
56
variant allelic effects
36
Fine-mapped variants
32
eQTL
2
caQTL
Date released
325
September, 2022
216
February, 2021
127
November, 2021
65
September, 2023
60
February, 2024
45
June, 2020
40
March, 2020
32
May, 2020
31
January, 2020
29
March, 2023
28
May, 2021
20
January, 2021
18
January, 2022
15
November, 2022
13
February, 2020
12
February, 2023
11
August, 2021
11
October, 2022
9
August, 2017
7
April, 2020
5
October, 2019
4
May, 2019
2
May, 2022
2
November, 2019
Available data
842
bed bed3+
186
bigWig
138
tsv
114
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1126
Homo sapiens
Biosample type
606
primary cell
390
tissue
109
cell line
21
in vitro differentiated cells
1
stem cell
Organ
696
epithelium
450
kidney
447
brain
411
connective tissue
364
musculature of body
310
lung
286
intestine
239
limb
234
heart
230
vasculature
227
pancreas
217
bodily fluid
206
blood
205
embryo
202
skin of body
179
blood vessel
172
large intestine
146
extraembryonic component
132
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
67
artery
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
42
spinal cord
33
spleen
25
testis
23
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
909
AMP
127
ENCODE
62
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1006
hg19
373
GRCh38
annotation_type!
sQTL
gene expression
BIOSAMPLE
TYPE
1127 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
15
7
1
2
2
1
2
endothelial cell of umbilical vein
2
6
4
5
2
1
hepatocyte
8
1
3
1
4
1
2
foreskin keratinocyte
11
4
4
keratinocyte
2
3
5
3
2
1
1
+ See 134 more…
tissue
brain
2
29
16
18
3
1
1
2
caudate nucleus
2
5
3
4
1
1
3
2
pigmented layer of retina
20
substantia nigra
5
2
3
1
3
3
layer of hippocampus
6
3
4
1
1
1
+ See 72 more…
cell line
EndoC_BH1
8
1
3
1
SK-N-DZ
1
4
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
1
2
1
1
1
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 3 more…
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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