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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
90
accessible chromatin
87
target gene predictions
56
chromatin state
33
binding sites
25
histone modifications
15
variant allelic effects
12
eQTL
9
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
144
September, 2022
96
February, 2021
50
November, 2021
22
June, 2020
16
February, 2024
14
May, 2021
13
October, 2022
12
March, 2020
9
January, 2020
9
May, 2020
8
August, 2021
7
August, 2017
7
November, 2022
3
April, 2020
3
February, 2020
3
May, 2022
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
358
bed bed3+
55
bigWig
49
bed bed9
12
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
428
Homo sapiens
Biosample type
239
primary cell
106
tissue
48
in vitro differentiated cells
34
cell line
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
185
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
369
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
428
hg19
135
GRCh38
2
hg18
annotation_type!
sQTL
BIOSAMPLE
TYPE
428 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
16
4
1
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
osteoblast
2
5
2
1
3
2
+ See 33 more…
tissue
spinal cord
14
1
8
7
adipose tissue
7
2
8
6
1
1
3
omental fat pad
5
2
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
subcutaneous abdominal adipose tissue
5
1
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
spinal cord
1
2
+ See 8 more…
stem cell
mesenchymal stem cell
1
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