Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
target gene predictions
45
binding sites
43
candidate regulatory elements
25
chromatin state
24
histone modifications
12
accessible chromatin
2
eQTL
1
gene expression
Date released
70
February, 2021
46
September, 2022
19
October, 2022
12
June, 2020
2
August, 2017
2
August, 2021
1
March, 2024
Available data
126
bed bed3+
23
bed bed9
1
tsv
Organism
152
Homo sapiens
Biosample type
140
cell line
9
primary cell
3
tissue
Organ
827
epithelium
577
kidney
376
connective tissue
354
brain
289
musculature of body
233
lung
228
pancreas
226
vasculature
216
intestine
197
heart
186
limb
170
blood vessel
161
bodily fluid
160
skin of body
152
blood
132
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
73
bone element
70
adipose tissue
68
mammary gland
63
prostate gland
61
artery
61
small intestine
56
placenta
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
31
spinal cord
26
spleen
25
uterus
22
testis
19
nerve
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
152
AMP
Genome assembly (visualization)
151
hg19
23
GRCh38
annotation_type!
target gene predictions
Fine-mapped variants
organ_slims!
lymph node
BIOSAMPLE
TYPE
152 results
search-icon
table-tab-icon
Clear Filters
binding sites
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
2
7
7
1
1
GM12878
2
2
2
1
1
GM06990
2
2
1
1
1
HL-60
2
2
1
1
1
CMK
1
2
1
1
1
+ See 23 more…
primary cell
peripheral blood mononuclear cell
1
4
1
peripheral blood stem cell
1
1
1
tissue
blood
2
whole blood
1
See all biosamples
Download