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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
976
histone modifications
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2396
February, 2021
838
September, 2022
120
May, 2021
101
October, 2022
76
February, 2024
63
May, 2020
34
August, 2017
22
August, 2021
6
February, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
March, 2020
1
May, 2022
1
November, 2019
Available data
3663
bed bed3+
898
tsv
869
bed bed9
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
15
bigWig
4
bigBed narrowPeak
1
bam
Organism
3662
Homo sapiens
Biosample type
1563
cell line
1135
tissue
742
primary cell
220
in vitro differentiated cells
1
stem cell
Organ
216
epithelium
191
brain
185
kidney
174
musculature of body
164
connective tissue
146
lung
134
intestine
121
bodily fluid
114
blood
108
skin of body
106
limb
98
heart
96
vasculature
83
large intestine
82
embryo
72
blood vessel
67
extraembryonic component
56
liver
55
stomach
52
pancreas
47
mammary gland
43
prostate gland
40
penis
39
bone element
38
small intestine
37
lymph node
35
placenta
34
ureter
30
eye
29
adipose tissue
29
adrenal gland
27
artery
22
thymus
21
gonad
19
esophagus
18
spinal cord
16
spleen
15
uterus
13
testis
11
vein
10
lymphoid tissue
9
thyroid gland
8
bronchus
8
mouth
8
nerve
8
ovary
7
lymphatic vessel
6
bone marrow
5
breast
4
skeleton
4
tongue
4
trachea
4
vagina
3
urinary bladder
1
nose
1
pituitary gland
Project
3659
AMP
3
T1D
1
ITG
Genome assembly (visualization)
3655
hg19
123
GRCh38
1
hg18
annotation_type!
target gene predictions
accessible chromatin
BIOSAMPLE
TYPE
3663 results
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Clear Filters
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
1
2
breast cancer cell
11
9
MCF-7
9
2
3
neuroblastoma cell
8
4
HepG2
2
5
3
1
+ See 733 more…
tissue
heart
37
1
1
2
stomach
40
1
brain
29
3
1
1
kidney
29
2
1
1
1
muscle of arm
33
1
+ See 188 more…
primary cell
monocyte
86
1
1
1
CD8-positive, alpha-beta T cell
7
30
common myeloid progenitor, CD34-positive
27
B cell
14
CD4-positive, alpha-beta memory T cell
14
+ See 197 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
1
neural progenitor cell
5
14
adipocyte
4
1
1
4
T-cell acute lymphoblastic leukemia
5
3
neuroblastoma cell line
6
2
+ See 83 more…
stem cell
H1-hESC
1
See all biosamples
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