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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
target gene predictions
59
chromatin state
accessible chromatin
8
histone modifications
6
binding sites
3
eQTL
3
gene expression
3
variant allelic effects
Date released
109
September, 2022
71
February, 2021
4
August, 2017
4
February, 2024
3
January, 2022
3
March, 2024
1
October, 2022
Available data
134
bed bed3+
55
bed bed9
3
tsv
Organism
195
Homo sapiens
Biosample type
169
tissue
22
cell line
4
primary cell
Organ
615
epithelium
527
kidney
348
brain
294
connective tissue
268
musculature of body
218
lung
199
vasculature
195
intestine
180
heart
175
limb
168
pancreas
153
blood vessel
149
bodily fluid
147
skin of body
140
blood
120
large intestine
119
embryo
111
liver
101
extraembryonic component
81
stomach
69
adipose tissue
61
mammary gland
58
bone element
58
prostate gland
58
small intestine
56
artery
52
placenta
50
penis
47
ureter
45
adrenal gland
45
lymph node
41
eye
34
gonad
33
thymus
32
spinal cord
31
esophagus
24
spleen
22
uterus
20
testis
19
nerve
17
vein
16
lymphoid tissue
15
thyroid gland
14
lymphatic vessel
14
mouth
14
ovary
10
bronchus
9
breast
8
bone marrow
8
vagina
7
skeleton
7
tongue
6
urinary bladder
4
trachea
3
pituitary gland
2
nose
1
pericardium
Project
195
AMP
Genome assembly (visualization)
189
hg19
58
GRCh38
annotation_type!
target gene predictions
accessible chromatin
BIOSAMPLE
TYPE
195 results
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Clear Filters
candidate regulatory elements
chromatin state
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
15
1
large intestine
27
13
1
sigmoid colon
10
5
transverse colon
8
4
1
Peyer's patch
7
3
+ See 14 more…
cell line
HT-29
2
1
1
1
SW480
2
1
1
1
HCT116
2
1
RKO
1
1
1
HCT-116 cell
2
+ See 3 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
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