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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1748
February, 2021
838
September, 2022
289
June, 2020
281
September, 2023
222
November, 2021
199
February, 2024
134
May, 2020
131
May, 2021
111
August, 2021
105
January, 2022
101
October, 2022
84
March, 2020
82
January, 2020
70
March, 2023
64
February, 2020
44
November, 2022
32
February, 2023
30
March, 2024
28
January, 2021
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3550
bed bed3+
900
tsv
541
bigWig
108
txt
24
csv
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
4625
Homo sapiens
Biosample type
1692
primary cell
1534
tissue
1178
cell line
267
in vitro differentiated cells
Organ
746
epithelium
494
kidney
309
connective tissue
270
brain
214
musculature of body
210
pancreas
194
vasculature
158
lung
149
heart
149
intestine
145
blood vessel
143
limb
112
skin of body
109
bodily fluid
104
liver
103
blood
92
embryo
89
large intestine
87
eye
72
extraembryonic component
65
adipose tissue
64
stomach
54
artery
52
bone element
48
mammary gland
43
prostate gland
41
lymph node
41
small intestine
38
adrenal gland
38
penis
38
ureter
37
placenta
30
gonad
28
esophagus
26
spinal cord
23
thymus
20
spleen
19
uterus
18
nerve
17
testis
15
lymphatic vessel
13
thyroid gland
13
vein
12
lymphoid tissue
12
ovary
12
skeleton
11
mouth
10
bronchus
8
breast
6
bone marrow
6
tongue
6
vagina
5
urinary bladder
3
trachea
2
nose
2
pituitary gland
1
pericardium
Project
4103
AMP
281
KPMP
222
ENCODE
32
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
3687
hg19
612
GRCh38
4
hg18
annotation_type!
target gene predictions
chromatin state
histone modifications
BIOSAMPLE
TYPE
4673 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
18
1
15
4
2
1
1
endothelial cell
15
2
9
1
2
2
common myeloid progenitor, CD34-positive
27
fibroblast
16
1
2
6
hepatocyte
1
8
1
13
2
+ See 415 more…
tissue
kidney
29
10
1
7
1
1
heart
37
5
1
3
2
stomach
40
3
1
1
islet of Langerhans
6
2
11
13
1
2
2
2
brain
29
2
1
1
2
1
+ See 215 more…
cell line
A549
21
1
2
EndoC_BH1
8
1
8
3
1
MCF-7
9
1
3
H1-hESC
1
1
2
8
K562
7
1
2
+ See 633 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
1
1
neural progenitor cell
5
10
7
cardiomyocytes
11
adipocyte
4
4
1
1
extended pluripotent stem (EPS) cells
9
+ See 89 more…
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