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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
target gene predictions
33
differential activity
24
candidate regulatory elements
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
29
February, 2021
26
May, 2021
25
February, 2024
17
September, 2022
11
November, 2021
10
January, 2021
8
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
4
January, 2022
4
June, 2020
3
January, 2020
2
February, 2020
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
111
bed bed3+
76
tsv
54
bigWig
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
216
Homo sapiens
Biosample type
102
primary cell
85
tissue
26
cell line
3
in vitro differentiated cells
Organ
774
epithelium
500
kidney
334
connective tissue
318
brain
221
musculature of body
216
pancreas
202
vasculature
162
lung
157
intestine
155
heart
151
blood vessel
145
limb
134
bodily fluid
127
blood
125
skin of body
118
liver
103
embryo
94
large intestine
91
eye
77
extraembryonic component
66
adipose tissue
65
stomach
59
artery
58
bone element
53
mammary gland
50
prostate gland
45
lymph node
43
penis
41
small intestine
40
placenta
38
adrenal gland
38
ureter
31
gonad
28
esophagus
26
spinal cord
24
thymus
21
uterus
20
spleen
18
nerve
18
testis
16
lymphatic vessel
14
vein
13
lymphoid tissue
13
thyroid gland
12
ovary
12
skeleton
11
bronchus
11
mouth
8
bone marrow
8
breast
6
tongue
6
vagina
5
trachea
5
urinary bladder
3
pituitary gland
2
nose
1
pericardium
Project
193
AMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
125
hg19
41
GRCh38
annotation_type!
target gene predictions
chromatin state
BIOSAMPLE
TYPE
216 results
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Clear Filters
accessible chromatin
gene expression
differential activity
candidate regulatory elements
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
1
2
1
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
3
3
1
+ See 10 more…
tissue
islet of Langerhans
6
11
13
1
1
2
2
2
2
body of pancreas
2
8
1
1
3
pancreas
5
5
1
1
1
1
endocrine pancreas
7
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
8988T
1
HPDE6-E6E7
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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