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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
candidate regulatory elements
target gene predictions
74
chromatin state
27
accessible chromatin
11
gene expression
7
binding sites
7
eQTL
7
histone modifications
7
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
136
September, 2022
92
February, 2021
15
February, 2024
8
November, 2021
6
February, 2020
6
June, 2020
6
March, 2020
5
January, 2020
5
May, 2020
3
August, 2017
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
October, 2019
Available data
201
bed bed3+
71
bed bed9
16
bigWig
14
tsv
3
bigBed bed9
Organism
295
Homo sapiens
Biosample type
236
tissue
45
primary cell
13
cell line
1
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
287
AMP
8
ENCODE
Genome assembly (visualization)
287
hg19
93
GRCh38
annotation_type!
target gene predictions
representative DNase hypersensitivity sites
BIOSAMPLE
TYPE
295 results
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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
1
1
muscle of leg
27
15
2
muscle of back
28
13
gastrocnemius medialis
8
4
1
skeletal muscle tissue
6
3
1
2
1
+ See 18 more…
primary cell
skeletal muscle satellite cell
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
3
1
1
1
type II muscle cell
3
1
1
1
skeletal muscle cell
2
1
1
1
+ See 4 more…
cell line
LHCN-M2
2
1
1
1
1
SJCRH30
2
1
1
A673
2
1
in vitro differentiated cells
myotube
1
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