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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
46
February, 2021
32
September, 2022
7
June, 2020
3
August, 2017
3
November, 2021
2
January, 2022
2
March, 2024
1
February, 2024
1
October, 2022
Available data
93
bed bed3+
bed bed9
3
bigWig
2
tsv
Organism
97
Homo sapiens
Biosample type
72
tissue
22
cell line
3
primary cell
Organ
777
epithelium
500
kidney
339
connective tissue
324
brain
224
musculature of body
220
pancreas
203
vasculature
163
lung
161
intestine
160
heart
152
blood vessel
145
limb
136
bodily fluid
129
blood
126
skin of body
121
liver
104
embryo
97
large intestine
91
eye
77
extraembryonic component
68
adipose tissue
66
stomach
59
artery
59
bone element
54
mammary gland
50
prostate gland
45
lymph node
43
penis
42
small intestine
40
placenta
38
adrenal gland
38
ureter
31
gonad
28
esophagus
26
spinal cord
24
thymus
21
uterus
20
spleen
18
nerve
18
testis
16
lymphatic vessel
15
vein
13
lymphoid tissue
13
thyroid gland
12
ovary
12
skeleton
11
bronchus
11
mouth
9
bone marrow
8
breast
6
tongue
6
vagina
5
trachea
5
urinary bladder
3
pituitary gland
2
nose
1
pericardium
Project
94
AMP
3
ENCODE
Genome assembly (visualization)
93
hg19
5
GRCh38
annotation_type!
target gene predictions
files.file_type!
bed bed9
BIOSAMPLE
TYPE
97 results
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Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
27
1
1
sigmoid colon
10
1
transverse colon
8
1
1
colonic mucosa
4
1
1
mucosa of rectum
4
1
+ See 7 more…
cell line
HT-29
2
1
1
1
SW480
2
1
1
1
RKO
1
1
1
1
HCT-116 cell
1
2
HCT116
2
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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