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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
977
histone modifications
913
accessible chromatin
817
binding sites
575
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2505
February, 2021
844
September, 2022
289
June, 2020
281
September, 2023
245
May, 2021
222
November, 2021
204
February, 2024
134
May, 2020
105
January, 2022
103
August, 2021
101
October, 2022
84
March, 2020
82
January, 2020
70
March, 2023
64
February, 2020
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
28
January, 2021
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4566
bed bed3+
898
tsv
bed bed9
543
bigWig
txt
40
bigBed bed9
34
bed bed9+
24
csv
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5567
Homo sapiens
Biosample type
1825
primary cell
1774
cell line
1648
tissue
365
in vitro differentiated cells
1
stem cell
Organ
699
epithelium
413
kidney
332
connective tissue
324
brain
224
musculature of body
220
pancreas
201
vasculature
163
lung
161
intestine
160
heart
152
blood vessel
145
limb
136
bodily fluid
129
blood
126
skin of body
121
liver
104
embryo
97
large intestine
91
eye
77
extraembryonic component
68
adipose tissue
66
stomach
59
artery
59
bone element
54
mammary gland
50
prostate gland
45
lymph node
43
penis
42
small intestine
40
placenta
38
adrenal gland
38
ureter
31
gonad
28
esophagus
26
spinal cord
24
thymus
21
uterus
20
spleen
18
nerve
18
testis
16
lymphatic vessel
15
vein
13
lymphoid tissue
13
thyroid gland
12
ovary
12
skeleton
11
bronchus
11
mouth
9
bone marrow
8
breast
6
tongue
6
vagina
5
trachea
5
urinary bladder
3
pituitary gland
2
nose
1
pericardium
Project
5047
AMP
281
KPMP
222
ENCODE
32
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4738
hg19
722
GRCh38
4
hg18
annotation_type!
target gene predictions
files.file_type!
txt
bed bed9
BIOSAMPLE
TYPE
5615 results
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Clear Filters
candidate regulatory elements
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
30
4
2
1
endothelial cell
1
15
2
6
1
2
2
hepatocyte
1
4
8
1
13
2
common myeloid progenitor, CD34-positive
27
+ See 417 more…
cell line
A549
21
1
1
2
EndoC_BH1
1
8
1
8
3
1
breast cancer cell
11
9
MCF-7
9
2
1
3
H1-hESC
1
1
1
2
8
+ See 756 more…
tissue
kidney
29
2
10
1
7
1
1
heart
37
1
5
1
3
2
stomach
40
1
3
1
1
islet of Langerhans
1
6
2
11
13
1
3
2
2
2
brain
29
3
2
1
1
2
1
+ See 256 more…
in vitro differentiated cells
neural progenitor cell
5
15
10
7
hematopoietic multipotent progenitor cell
19
1
1
1
1
adipocyte
4
1
4
1
1
4
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 113 more…
stem cell
H1-hESC
1
See all biosamples
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