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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
accessible chromatin
48
gene expression
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
7
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
47
March, 2023
30
September, 2022
29
February, 2021
26
May, 2021
25
February, 2024
11
November, 2021
10
January, 2021
8
August, 2021
7
August, 2018
6
March, 2020
May, 2020
6
October, 2019
4
January, 2022
4
June, 2020
3
August, 2017
3
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
109
bed bed3+
76
tsv
52
bigWig
13
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
227
Homo sapiens
Biosample type
102
primary cell
94
tissue
28
cell line
3
in vitro differentiated cells
Organ
812
epithelium
557
kidney
373
connective tissue
367
brain
288
musculature of body
233
lung
227
pancreas
219
vasculature
216
intestine
194
heart
183
limb
167
blood vessel
161
bodily fluid
160
skin of body
152
blood
132
liver
131
embryo
130
large intestine
110
extraembryonic component
98
eye
89
stomach
73
adipose tissue
73
bone element
68
mammary gland
63
prostate gland
61
artery
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
48
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
testis
19
nerve
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
17
vein
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
204
AMP
11
ENCODE
10
T1D
2
community
Genome assembly (visualization)
136
hg19
52
GRCh38
annotation_type!
target gene predictions
month_released!
May, 2019
May, 2020
BIOSAMPLE
TYPE
227 results
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Clear Filters
accessible chromatin
gene expression
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
1
2
1
pancreatic beta cell
8
3
3
1
pancreatic alpha cell
7
3
3
1
pancreatic acinar cell
6
3
3
1
pancreatic delta cell
5
3
3
1
+ See 10 more…
tissue
islet of Langerhans
4
11
3
13
1
2
2
2
2
body of pancreas
2
8
4
1
3
pancreas
5
5
3
1
1
1
endocrine pancreas
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
3
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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