Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
target gene predictions
45
binding sites
candidate regulatory elements
25
chromatin state
24
histone modifications
12
accessible chromatin
2
eQTL
1
gene expression
Date released
50
February, 2021
23
September, 2022
19
October, 2022
12
June, 2020
2
August, 2017
2
August, 2021
1
March, 2024
Available data
83
bed bed3+
23
bed bed9
1
tsv
Organism
109
Homo sapiens
Biosample type
101
cell line
5
primary cell
3
tissue
Organ
712
epithelium
399
kidney
293
connective tissue
260
brain
203
pancreas
170
vasculature
144
musculature of body
129
blood vessel
125
heart
114
bodily fluid
109
blood
109
liver
103
intestine
102
lung
91
limb
85
skin of body
80
eye
74
embryo
61
large intestine
54
adipose tissue
52
artery
51
extraembryonic component
48
bone element
40
mammary gland
38
stomach
36
prostate gland
32
lymph node
27
placenta
25
penis
24
adrenal gland
24
small intestine
22
gonad
18
esophagus
18
spinal cord
17
ureter
16
uterus
15
thymus
14
lymphatic vessel
13
nerve
13
testis
11
skeleton
11
spleen
11
vein
9
bronchus
9
lymphoid tissue
9
thyroid gland
8
bone marrow
8
ovary
7
mouth
5
breast
5
trachea
4
tongue
4
urinary bladder
4
vagina
3
pituitary gland
2
nose
1
pericardium
Project
109
AMP
Genome assembly (visualization)
108
hg19
23
GRCh38
annotation_type!
target gene predictions
candidate regulatory elements
month_released!
May, 2020
BIOSAMPLE
TYPE
109 results
search-icon
table-tab-icon
Clear Filters
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
2
7
1
1
GM12878
2
2
1
1
GM06990
2
1
1
1
GM19240
2
1
1
1
HL-60
2
1
1
1
+ See 20 more…
primary cell
peripheral blood stem cell
1
1
1
peripheral blood mononuclear cell
1
1
tissue
blood
2
whole blood
1
See all biosamples
Download