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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
224
accessible chromatin
target gene predictions
143
candidate regulatory elements
92
differential activity
binding sites
78
chromatin state
52
histone modifications
41
variant allelic effects
5
eQTL
2
caQTL
Date released
206
February, 2021
155
September, 2023
148
September, 2022
78
November, 2021
70
February, 2024
38
March, 2023
37
June, 2020
25
August, 2021
24
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
January, 2021
9
February, 2020
7
April, 2020
6
August, 2018
5
August, 2017
5
October, 2019
4
March, 2020
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
463
bed bed3+
325
tsv
173
bigWig
78
txt
73
bed bed9
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
891
Homo sapiens
Biosample type
682
primary cell
130
cell line
57
tissue
22
in vitro differentiated cells
Organ
784
epithelium
570
kidney
374
brain
351
connective tissue
288
musculature of body
228
pancreas
224
lung
214
vasculature
210
intestine
201
heart
193
limb
163
blood vessel
142
skin of body
124
large intestine
122
liver
118
embryo
115
bodily fluid
107
blood
107
extraembryonic component
94
eye
89
stomach
74
adipose tissue
65
bone element
61
artery
61
small intestine
56
mammary gland
55
prostate gland
53
placenta
52
adrenal gland
51
ureter
46
penis
41
lymph node
36
gonad
35
esophagus
34
thymus
32
spinal cord
25
spleen
22
nerve
21
uterus
19
testis
18
lymphoid tissue
17
thyroid gland
16
lymphatic vessel
16
ovary
16
vein
15
mouth
15
skeleton
11
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
pituitary gland
3
trachea
1
pericardium
Project
639
AMP
155
KPMP
78
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
541
hg19
202
GRCh38
annotation_type!
target gene predictions
binding sites
BIOSAMPLE
TYPE
891 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
1
2
1
2
hepatocyte
13
8
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
glomerular endothelial cell
14
2
2
1
1
foreskin keratinocyte
11
4
+ See 146 more…
cell line
EndoC_BH1
8
8
3
1
K562
1
7
7
1
GM12878
1
2
2
1
CMK
1
2
1
1
GM06990
1
2
1
1
+ See 33 more…
tissue
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
breast epithelium
1
5
2
blood
2
pancreatic ductal cell
2
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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