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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
229
accessible chromatin
target gene predictions
160
candidate regulatory elements
92
differential activity
91
binding sites
86
chromatin state
53
histone modifications
41
variant allelic effects
8
eQTL
2
caQTL
Date released
276
February, 2021
164
September, 2022
155
September, 2023
79
November, 2021
76
February, 2024
41
June, 2020
38
March, 2023
26
October, 2022
25
August, 2021
24
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
January, 2021
9
February, 2020
7
April, 2020
6
August, 2018
5
August, 2017
5
March, 2024
5
October, 2019
4
March, 2020
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
577
bed bed3+
327
tsv
174
bigWig
81
bed bed9
78
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1018
Homo sapiens
Biosample type
717
primary cell
187
cell line
89
tissue
25
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
765
AMP
155
KPMP
79
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
663
hg19
220
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
1018 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
2
1
2
1
2
hepatocyte
13
8
1
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 149 more…
cell line
EndoC_BH1
8
8
3
1
K562
1
7
2
7
1
GM12878
1
2
2
2
1
GM06990
1
2
2
1
1
HL-60
1
2
2
1
1
+ See 36 more…
tissue
pigmented layer of retina
20
ovary
1
1
8
4
1
testis
1
1
7
1
3
1
1
esophagus squamous epithelium
1
6
2
breast epithelium
1
5
2
+ See 19 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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