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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
target gene predictions
gene expression
48
chromatin state
31
binding sites
25
histone modifications
19
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
87
February, 2021
80
September, 2022
32
November, 2021
20
June, 2020
16
February, 2024
12
October, 2022
10
August, 2021
9
January, 2020
9
May, 2020
7
August, 2017
7
November, 2022
6
January, 2022
6
March, 2020
6
March, 2023
6
September, 2023
3
April, 2020
3
May, 2022
2
February, 2020
2
November, 2020
2
October, 2019
2
September, 2018
1
February, 2023
1
January, 2021
1
June, 2021
Available data
252
bed bed3+
55
bigWig
41
bed bed9
22
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
331
Homo sapiens
Biosample type
200
primary cell
67
tissue
36
in vitro differentiated cells
28
cell line
Organ
574
epithelium
375
kidney
371
brain
331
connective tissue
284
musculature of body
232
lung
213
intestine
199
vasculature
190
limb
185
heart
185
pancreas
160
bodily fluid
158
skin of body
154
blood vessel
151
blood
128
large intestine
121
embryo
111
liver
110
extraembryonic component
99
eye
87
stomach
69
bone element
68
mammary gland
63
adipose tissue
62
prostate gland
61
small intestine
59
artery
56
placenta
53
lymph node
53
penis
51
adrenal gland
51
ureter
37
gonad
35
thymus
33
esophagus
33
spinal cord
25
spleen
23
uterus
21
testis
20
nerve
18
vein
17
lymphoid tissue
16
thyroid gland
15
lymphatic vessel
15
ovary
15
skeleton
14
mouth
13
bronchus
10
bone marrow
9
breast
7
tongue
7
vagina
6
urinary bladder
5
trachea
3
nose
2
pituitary gland
Project
285
AMP
32
ENCODE
6
KPMP
4
ITG
3
LungMap
1
T1D
Genome assembly (visualization)
307
hg19
104
GRCh38
2
hg18
annotation_type!
target gene predictions
gene expression
BIOSAMPLE
TYPE
331 results
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Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
1
2
6
foreskin fibroblast
1
6
1
4
2
osteoblast
5
2
1
3
2
fibroblast of lung
6
4
2
pericyte cell
10
1
1
+ See 34 more…
tissue
adipose tissue
2
7
6
1
4
1
subcutaneous adipose tissue
2
2
1
6
1
1
3
omental fat pad
2
5
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 3 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
mesenchymal stem cell
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 4 more…
cell line
GM23248
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
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