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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
205
candidate regulatory elements
target gene predictions
115
chromatin state
103
accessible chromatin
50
gene expression
38
binding sites
29
histone modifications
20
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
214
September, 2022
176
February, 2021
38
November, 2021
26
June, 2020
19
February, 2024
15
September, 2023
14
October, 2022
11
August, 2021
10
January, 2020
9
February, 2020
9
May, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
6
April, 2020
6
March, 2020
3
May, 2021
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
1
March, 2024
Available data
404
bed bed3+
108
bed bed9
64
bigWig
64
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
601
Homo sapiens
Biosample type
245
primary cell
220
tissue
98
cell line
38
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
537
AMP
38
ENCODE
15
KPMP
6
LungMap
4
ITG
1
T1D
Genome assembly (visualization)
528
hg19
178
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
601 results
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Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
1
2
6
osteoblast
2
1
5
2
3
2
foreskin fibroblast
6
1
1
4
2
fibroblast of lung
6
4
2
pericyte cell
1
1
10
+ See 47 more…
tissue
lung
33
16
1
1
left lung
26
13
right lung
22
11
1
adipose tissue
7
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
+ See 8 more…
cell line
A549
21
18
1
2
1
IMR-90
2
1
1
2
1
GM23248
2
1
1
1
1
PC-9
2
1
1
1
1
WI38
5
1
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
1
mesenchymal stem cell
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 5 more…
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