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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
gene expression
212
accessible chromatin
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
109
February, 2021
102
September, 2022
78
November, 2021
62
September, 2023
60
February, 2024
29
March, 2023
25
June, 2020
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
August, 2021
10
January, 2021
7
April, 2020
7
May, 2021
6
October, 2022
5
October, 2019
3
August, 2017
2
May, 2022
1
February, 2020
1
November, 2019
Available data
425
bed bed3+
164
bigWig
90
tsv
50
bed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
574
Homo sapiens
Biosample type
470
primary cell
54
tissue
33
cell line
17
in vitro differentiated cells
Organ
574
epithelium
375
kidney
371
brain
331
connective tissue
284
musculature of body
232
lung
213
intestine
199
vasculature
190
limb
185
heart
185
pancreas
160
bodily fluid
158
skin of body
154
blood vessel
151
blood
128
large intestine
121
embryo
111
liver
110
extraembryonic component
99
eye
87
stomach
69
bone element
68
mammary gland
63
adipose tissue
62
prostate gland
61
small intestine
59
artery
56
placenta
53
lymph node
53
penis
51
adrenal gland
51
ureter
37
gonad
35
thymus
33
esophagus
33
spinal cord
25
spleen
23
uterus
21
testis
20
nerve
18
vein
17
lymphoid tissue
16
thyroid gland
15
lymphatic vessel
15
ovary
15
skeleton
14
mouth
13
bronchus
10
bone marrow
9
breast
7
tongue
7
vagina
6
urinary bladder
5
trachea
3
nose
2
pituitary gland
Project
415
AMP
78
ENCODE
62
KPMP
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
477
hg19
176
GRCh38
annotation_type!
target gene predictions
gene expression
BIOSAMPLE
TYPE
574 results
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Clear Filters
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
2
2
1
1
2
hepatocyte
8
1
1
1
2
4
endothelial cell of umbilical vein
2
6
5
2
1
foreskin keratinocyte
11
4
pancreatic ductal cell
6
3
1
1
2
+ See 126 more…
tissue
pigmented layer of retina
20
esophagus squamous epithelium
1
6
2
breast epithelium
1
5
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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