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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
147
accessible chromatin
101
candidate regulatory elements
target gene predictions
58
chromatin state
51
gene expression
37
binding sites
29
histone modifications
23
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
128
February, 2021
100
September, 2022
36
November, 2021
29
November, 2022
26
June, 2020
25
February, 2023
19
February, 2024
15
September, 2023
14
October, 2022
12
January, 2020
11
August, 2021
11
February, 2020
11
May, 2020
7
August, 2017
7
January, 2022
7
March, 2023
6
March, 2020
3
April, 2020
3
May, 2021
3
May, 2022
3
November, 2020
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
January, 2021
1
June, 2021
1
March, 2024
Available data
344
bed bed3+
91
bigWig
68
tsv
51
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
488
Homo sapiens
Biosample type
250
primary cell
158
tissue
44
in vitro differentiated cells
36
cell line
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
427
AMP
36
ENCODE
15
KPMP
4
ITG
3
LungMap
2
community
1
T1D
Genome assembly (visualization)
411
hg19
122
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
488 results
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Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
1
2
6
osteoblast
5
2
1
2
3
2
foreskin fibroblast
1
6
1
4
2
fibroblast of lung
6
4
2
pericyte cell
10
1
1
+ See 48 more…
tissue
retina
23
6
3
1
1
1
1
1
adipose tissue
2
7
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
pigmented layer of retina
20
omental fat pad
2
5
2
2
2
3
+ See 11 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
1
mesenchymal stem cell
1
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
fibroblast
1
1
+ See 6 more…
cell line
WERI-Rb-1
1
2
1
2
1
GM23248
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 9 more…
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