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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
39
accessible chromatin
target gene predictions
32
chromatin state
28
gene expression
21
binding sites
20
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
62
February, 2021
60
September, 2022
29
February, 2024
10
August, 2021
10
June, 2020
7
March, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2022
2
February, 2020
2
October, 2022
1
January, 2021
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
134
bed bed3+
33
bigWig
32
tsv
28
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
208
Homo sapiens
Biosample type
70
primary cell
66
cell line
66
tissue
6
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
202
AMP
5
ENCODE
1
T1D
Genome assembly (visualization)
172
hg19
82
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
208 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
8
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
3
1
1
1
1
pancreatic endothelial cell
1
3
mononuclear cell of bone marrow
2
1
+ See 6 more…
cell line
HepG2
2
2
2
3
5
MG63
2
1
1
1
1
HuH-7
1
1
1
1
1
OCI-LY1
2
1
1
1
SJSA1
2
1
1
1
+ See 10 more…
tissue
liver
13
4
9
1
1
2
7
1
1
right lobe of liver
2
1
1
1
3
bone tissue
4
femur
2
1
arm bone
1
1
+ See 9 more…
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
See all biosamples
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