Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
candidate regulatory elements
target gene predictions
122
chromatin state
115
accessible chromatin
60
gene expression
38
binding sites
32
histone modifications
26
eQTL
23
variant allelic effects
15
differential activity
12
Fine-mapped variants
4
caQTL
2
pQTL
Date released
216
September, 2022
201
February, 2021
40
November, 2021
33
February, 2024
26
June, 2020
15
February, 2020
15
January, 2020
15
October, 2022
15
September, 2023
14
May, 2020
12
August, 2021
12
March, 2020
10
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
6
May, 2022
3
April, 2020
3
May, 2021
3
November, 2020
3
October, 2019
2
March, 2024
2
May, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2021
1
June, 2021
Available data
453
bed bed3+
112
bed bed9
77
tsv
71
bigWig
7
txt
5
bigBed bed9
1
bigBed narrowPeak
Organism
675
Homo sapiens
Biosample type
319
tissue
276
primary cell
41
cell line
39
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
380
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
612
AMP
40
ENCODE
15
KPMP
4
ITG
3
LungMap
1
T1D
Genome assembly (visualization)
596
hg19
197
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
675 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
muscle of arm
33
16
1
1
muscle of leg
27
15
2
muscle of back
28
13
adipose tissue
7
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
+ See 27 more…
primary cell
fibroblast
16
1
2
6
osteoblast
2
1
5
2
3
2
foreskin fibroblast
6
1
1
4
2
fibroblast of lung
6
4
2
pericyte cell
1
1
10
+ See 51 more…
cell line
GM23248
2
1
1
1
1
LHCN-M2
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
SJCRH30
2
1
1
A673
2
1
+ See 10 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
1
mesenchymal stem cell
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 6 more…
See all biosamples
Download