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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
259
gene expression
234
accessible chromatin
210
candidate regulatory elements
target gene predictions
111
chromatin state
92
differential activity
49
variant allelic effects
47
binding sites
30
histone modifications
12
Fine-mapped variants
10
eQTL
2
caQTL
Date released
261
February, 2021
210
September, 2022
155
September, 2023
78
November, 2021
76
February, 2024
38
March, 2023
33
June, 2020
25
May, 2020
24
May, 2021
23
August, 2021
22
January, 2020
16
February, 2020
16
March, 2020
15
November, 2022
12
February, 2023
10
January, 2021
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
3
August, 2017
3
January, 2022
3
March, 2024
3
November, 2019
2
May, 2019
2
May, 2022
1
July, 2020
Available data
571
bed bed3+
346
tsv
187
bigWig
108
bed bed9
78
txt
11
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1056
Homo sapiens
Biosample type
708
primary cell
273
tissue
50
cell line
25
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
804
AMP
155
KPMP
78
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
698
hg19
276
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
1056 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
2
2
1
1
2
hepatocyte
13
8
1
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 145 more…
tissue
muscle of arm
1
33
16
1
muscle of leg
2
27
15
spinal cord
1
14
7
1
tibial nerve
2
3
6
4
2
3
2
pigmented layer of retina
20
+ See 40 more…
cell line
EndoC_BH1
8
8
3
1
GM23248
1
2
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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