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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
candidate regulatory elements
target gene predictions
41
accessible chromatin
38
chromatin state
29
gene expression
22
binding sites
20
histone modifications
9
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
72
February, 2021
72
September, 2022
29
February, 2024
11
June, 2020
10
August, 2021
7
March, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2022
2
February, 2020
2
January, 2022
2
November, 2019
2
October, 2022
1
January, 2021
1
July, 2020
1
March, 2024
1
September, 2018
Available data
152
bed bed3+
34
bed bed9
34
bigWig
33
tsv
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
234
Homo sapiens
Biosample type
92
tissue
70
primary cell
66
cell line
6
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
228
AMP
5
ENCODE
1
T1D
Genome assembly (visualization)
196
hg19
90
GRCh38
2
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
234 results
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Clear Filters
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
13
4
9
1
1
2
7
1
1
spleen
15
2
6
1
1
1
right lobe of liver
2
1
1
1
3
bone tissue
4
femur
2
1
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primary cell
hepatocyte
1
8
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
3
1
1
1
1
pancreatic endothelial cell
1
3
mononuclear cell of bone marrow
2
1
+ See 6 more…
cell line
HepG2
2
2
2
3
5
MG63
2
1
1
1
1
HuH-7
1
1
1
1
1
OCI-LY1
2
1
1
1
SJSA1
2
1
1
1
+ See 10 more…
in vitro differentiated cells
hepatocyte
2
1
hepatocyte(AFP)
3
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