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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
903
accessible chromatin
binding sites
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1690
February, 2021
1678
September, 2022
333
November, 2021
288
June, 2020
285
May, 2021
231
February, 2024
72
May, 2020
66
January, 2020
56
January, 2021
51
August, 2021
44
March, 2020
41
November, 2022
34
August, 2017
30
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
7
October, 2022
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4982
bed bed3+
900
tsv
869
bed bed9
542
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
12
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4937
Homo sapiens
Biosample type
1777
tissue
1478
cell line
1419
primary cell
303
in vitro differentiated cells
4
stem cell
Organ
466
epithelium
291
kidney
284
connective tissue
283
brain
267
musculature of body
229
lung
219
intestine
165
embryo
165
limb
158
heart
146
skin of body
144
bodily fluid
143
pancreas
136
blood
131
large intestine
129
vasculature
109
extraembryonic component
100
blood vessel
91
stomach
90
eye
85
liver
72
uterus
64
small intestine
62
bone element
60
mammary gland
56
adrenal gland
54
prostate gland
53
placenta
48
ureter
47
penis
44
adipose tissue
42
lymph node
37
thymus
36
artery
34
gonad
31
esophagus
27
spinal cord
25
spleen
18
lymphoid tissue
17
ovary
16
testis
16
thyroid gland
15
skeleton
14
vein
13
mouth
12
lymphatic vessel
12
nerve
11
bronchus
11
pituitary gland
9
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
3
nose
3
trachea
Project
4570
AMP
333
ENCODE
59
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4975
hg19
794
GRCh38
annotation_type!
variant allelic effects
binding sites
BIOSAMPLE
TYPE
4982 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
stomach
40
21
1
3
heart
37
20
1
5
kidney
29
14
2
10
1
brain
29
16
3
2
lung
33
17
+ See 206 more…
cell line
HeLa-S3
5
55
A549
21
19
1
1
H1-hESC
1
39
1
1
K562
7
23
1
1
1
HFFc6
19
+ See 624 more…
primary cell
monocyte
2
86
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
CD14-positive monocyte
8
19
+ See 313 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
adipocyte
4
6
1
4
4
mesenchymal stem cell
3
3
1
1
embryonic stem cell
1
1
5
+ See 100 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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