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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
chromatin state
913
accessible chromatin
binding sites
683
gene expression
169
eQTL
167
differential activity
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
1871
February, 2021
1678
September, 2022
384
May, 2021
333
November, 2021
311
February, 2024
289
June, 2020
286
September, 2023
127
August, 2021
127
March, 2020
106
January, 2022
83
January, 2020
73
May, 2020
70
March, 2023
64
February, 2020
56
January, 2021
44
November, 2022
31
February, 2023
30
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
7
October, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4942
bed bed3+
898
tsv
540
bigWig
108
txt
24
csv
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6001
Homo sapiens
Biosample type
2091
primary cell
2057
tissue
1514
cell line
382
in vitro differentiated cells
3
stem cell
Organ
812
epithelium
552
kidney
363
connective tissue
361
brain
287
musculature of body
244
pancreas
230
lung
221
intestine
197
vasculature
189
heart
184
limb
174
embryo
151
blood vessel
150
skin of body
145
bodily fluid
137
blood
132
large intestine
122
liver
110
extraembryonic component
93
stomach
92
eye
75
uterus
74
adipose tissue
66
bone element
64
small intestine
59
mammary gland
58
adrenal gland
57
artery
56
prostate gland
54
placenta
48
ureter
47
penis
42
lymph node
39
gonad
37
thymus
36
esophagus
33
spinal cord
27
spleen
19
lymphoid tissue
19
nerve
19
ovary
19
testis
18
thyroid gland
17
lymphatic vessel
15
mouth
15
skeleton
14
vein
13
pituitary gland
11
breast
11
bronchus
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
3
nose
3
trachea
1
pericardium
Project
5342
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5080
hg19
996
GRCh38
3
hg18
annotation_type!
variant allelic effects
chromatin state
binding sites
BIOSAMPLE
TYPE
6048 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
gene expression
eQTL
differential activity
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
9
1
2
B cell
14
10
6
2
+ See 431 more…
tissue
stomach
40
21
1
3
1
1
heart
37
20
1
5
3
kidney
29
14
2
10
7
1
brain
29
16
3
2
1
2
lung
33
17
1
1
+ See 251 more…
cell line
HeLa-S3
5
55
H1-hESC
1
39
1
1
8
A549
21
19
1
1
K562
7
23
1
1
EndoC_BH1
1
1
8
8
3
+ See 628 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 118 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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