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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
977
histone modifications
chromatin state
817
binding sites
643
accessible chromatin
512
gene expression
166
eQTL
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2589
February, 2021
1678
September, 2022
384
May, 2021
316
February, 2024
289
June, 2020
128
March, 2020
123
August, 2021
106
January, 2022
96
October, 2022
83
January, 2020
73
May, 2020
64
February, 2020
61
March, 2023
44
November, 2022
31
February, 2023
30
March, 2024
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5347
bed bed3+
617
tsv
271
bigWig
108
txt
24
csv
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6112
Homo sapiens
Biosample type
2148
cell line
2088
tissue
1499
primary cell
420
in vitro differentiated cells
3
stem cell
Organ
544
epithelium
416
kidney
377
brain
320
connective tissue
283
musculature of body
227
lung
209
pancreas
208
intestine
191
bodily fluid
186
limb
185
embryo
184
heart
182
blood
174
vasculature
158
skin of body
142
blood vessel
132
large intestine
130
liver
110
extraembryonic component
94
eye
84
stomach
77
uterus
76
adipose tissue
71
bone element
65
mammary gland
64
prostate gland
60
small intestine
58
artery
55
placenta
54
lymph node
54
penis
48
adrenal gland
48
ureter
40
gonad
37
thymus
35
spinal cord
32
esophagus
28
spleen
22
testis
19
lymphoid tissue
19
nerve
17
ovary
17
vein
16
thyroid gland
15
mouth
15
skeleton
13
pituitary gland
11
breast
10
bronchus
10
lymphatic vessel
8
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6159
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5482
hg19
666
GRCh38
4
hg18
annotation_type!
variant allelic effects
chromatin state
BIOSAMPLE
TYPE
6159 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
1
8
A549
21
19
1
2
1
K562
7
23
1
2
1
MCF-7
9
6
2
3
1
+ See 763 more…
tissue
heart
37
20
1
1
5
3
stomach
40
21
1
3
1
1
kidney
29
14
2
1
10
7
1
brain
29
16
3
1
2
1
2
lung
33
17
1
1
+ See 256 more…
primary cell
monocyte
1
86
1
17
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
3
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
2
2
hepatocyte
1
2
4
1
7
13
+ See 299 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 119 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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