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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
chromatin state
913
accessible chromatin
817
binding sites
683
gene expression
eQTL
167
differential activity
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2586
February, 2021
1678
September, 2022
381
May, 2021
333
November, 2021
310
February, 2024
289
June, 2020
286
September, 2023
128
March, 2020
101
August, 2021
98
October, 2022
83
January, 2020
73
May, 2020
69
March, 2023
56
January, 2021
44
November, 2022
38
February, 2020
31
February, 2023
30
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
August, 2018
9
October, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5749
bed bed3+
873
tsv
540
bigWig
108
txt
24
csv
12
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6650
Homo sapiens
Biosample type
2147
cell line
2147
primary cell
1978
tissue
420
in vitro differentiated cells
3
stem cell
Organ
852
epithelium
555
kidney
375
connective tissue
348
brain
287
musculature of body
238
lung
234
pancreas
224
intestine
212
vasculature
189
bodily fluid
188
heart
187
embryo
181
limb
180
blood
165
skin of body
161
blood vessel
136
large intestine
127
liver
112
extraembryonic component
97
eye
92
stomach
78
uterus
74
bone element
71
mammary gland
63
adipose tissue
63
prostate gland
63
small intestine
58
artery
57
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
39
gonad
38
thymus
33
esophagus
33
spinal cord
27
spleen
20
testis
19
lymphatic vessel
19
lymphoid tissue
18
ovary
17
nerve
17
thyroid gland
17
vein
15
skeleton
14
mouth
13
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5993
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
9
community
2
ITG
Genome assembly (visualization)
5833
hg19
876
GRCh38
1
hg18
annotation_type!
variant allelic effects
eQTL
chromatin state
BIOSAMPLE
TYPE
6696 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
EndoC_BH1
1
1
8
1
8
3
+ See 762 more…
primary cell
monocyte
2
86
18
1
15
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
2
B cell
14
10
6
2
+ See 430 more…
tissue
heart
37
20
1
5
1
3
stomach
40
21
1
3
1
kidney
29
14
2
10
1
7
brain
29
16
3
2
1
1
lung
33
17
1
+ See 247 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 119 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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