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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
gene expression
Date released
65
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
February, 2024
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
3
bigWig
2
tsv
Organism
136
Homo sapiens
Biosample type
100
tissue
30
cell line
6
primary cell
Organ
855
epithelium
558
kidney
390
connective tissue
359
brain
293
musculature of body
245
pancreas
238
lung
224
intestine
215
vasculature
191
bodily fluid
191
heart
187
embryo
184
limb
182
blood
165
skin of body
164
blood vessel
136
large intestine
134
liver
112
extraembryonic component
98
eye
92
stomach
78
uterus
74
bone element
73
adipose tissue
71
mammary gland
63
prostate gland
63
small intestine
60
artery
57
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
39
gonad
38
thymus
34
spinal cord
33
esophagus
27
spleen
20
testis
19
lymphatic vessel
19
lymphoid tissue
18
nerve
18
ovary
17
thyroid gland
17
vein
15
skeleton
14
mouth
13
bronchus
12
pituitary gland
11
bone marrow
10
breast
8
tongue
8
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
130
AMP
6
ENCODE
Genome assembly (visualization)
134
hg19
8
GRCh38
annotation_type!
variant allelic effects
chromatin state
month_released!
January, 2022
BIOSAMPLE
TYPE
136 results
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candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 6 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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