Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
172
Homo sapiens
Biosample type
132
tissue
34
cell line
6
primary cell
Organ
908
epithelium
635
kidney
436
connective tissue
431
brain
367
musculature of body
309
lung
283
intestine
262
pancreas
248
vasculature
242
heart
234
limb
218
bodily fluid
215
embryo
207
blood
200
skin of body
192
blood vessel
172
large intestine
151
liver
145
extraembryonic component
116
stomach
107
eye
89
bone element
86
mammary gland
83
adipose tissue
83
small intestine
82
uterus
76
prostate gland
72
placenta
71
adrenal gland
68
artery
64
penis
62
lymph node
61
ureter
49
thymus
47
gonad
42
spinal cord
40
esophagus
33
spleen
24
lymphoid tissue
24
testis
22
nerve
22
ovary
22
vein
21
lymphatic vessel
21
thyroid gland
18
mouth
18
skeleton
15
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
166
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
41
GRCh38
annotation_type!
variant allelic effects
month_released!
January, 2022
BIOSAMPLE
TYPE
172 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download