Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
518
target gene predictions
511
chromatin state
197
accessible chromatin
115
eQTL
110
gene expression
89
histone modifications
74
Fine-mapped variants
variant allelic effects
36
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
919
September, 2022
163
February, 2021
104
March, 2020
63
June, 2020
62
January, 2020
56
January, 2022
48
February, 2020
46
August, 2021
31
May, 2021
28
March, 2024
26
February, 2023
25
February, 2024
19
August, 2017
17
November, 2022
12
May, 2020
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
876
bed bed3+
486
bed bed9
212
tsv
120
bigWig
31
bigBed bed9
1
bam
Organism
1665
Homo sapiens
Biosample type
2057
primary cell
2021
cell line
1667
tissue
385
in vitro differentiated cells
4
stem cell
Organ
258
brain
167
musculature of body
163
kidney
140
heart
136
limb
129
intestine
93
lung
91
pancreas
75
large intestine
73
connective tissue
62
adipose tissue
60
blood vessel
60
vasculature
59
eye
57
stomach
55
extraembryonic component
50
epithelium
43
liver
43
small intestine
34
adrenal gland
34
placenta
32
artery
30
ureter
28
thymus
24
gonad
22
embryo
22
spinal cord
20
esophagus
19
spleen
18
bone element
17
nerve
15
skin of body
14
skeleton
13
ovary
12
thyroid gland
11
prostate gland
11
testis
10
lymphoid tissue
10
uterus
8
breast
7
mouth
7
urinary bladder
6
tongue
6
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
1662
AMP
5
ITG
Genome assembly (visualization)
1484
hg19
734
GRCh38
3
hg18
annotation_type!
variant allelic effects
candidate regulatory elements
organ_slims!
trachea
BIOSAMPLE
TYPE
1667 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
20
21
5
3
1
1
kidney
14
16
10
1
7
2
1
stomach
21
19
3
1
1
1
brain
16
18
2
2
1
3
1
islet of Langerhans
1
3
6
13
11
1
2
2
2
2
+ See 250 more…
See all biosamples
Download