Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
44
candidate regulatory elements
29
target gene predictions
25
chromatin state
22
accessible chromatin
17
gene expression
13
eQTL
10
binding sites
7
histone modifications
6
Fine-mapped variants
variant allelic effects
2
differential activity
Date released
66
September, 2022
59
February, 2021
8
March, 2020
6
August, 2021
6
June, 2020
5
February, 2020
4
January, 2020
3
January, 2022
3
May, 2021
2
August, 2017
2
February, 2024
2
January, 2021
2
September, 2018
1
January, 2018
1
May, 2020
1
May, 2022
1
November, 2021
1
November, 2022
1
October, 2022
Available data
116
bed bed3+
26
tsv
22
bed bed9
15
bigWig
1
bed bed9+
1
bigBed bed9
Organism
175
Homo sapiens
Biosample type
103
tissue
56
cell line
15
primary cell
1
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
172
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
151
hg19
46
GRCh38
2
hg18
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
175 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
binding sites
histone modifications
Fine-mapped variants
differential activity
tissue
adipose tissue
7
8
6
2
3
4
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
bone tissue
4
+ See 14 more…
cell line
MG63
2
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
L1-S8
2
1
1
1
OCI-LY3
2
1
1
1
+ See 8 more…
primary cell
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
mononuclear cell of bone marrow
2
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
bone cell
1
+ See 2 more…
in vitro differentiated cells
white adipose cell
1
See all biosamples
Download