Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
148
candidate regulatory elements
83
target gene predictions
76
chromatin state
29
accessible chromatin
11
gene expression
9
binding sites
9
histone modifications
7
eQTL
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
207
September, 2022
97
February, 2021
13
February, 2024
12
November, 2021
9
March, 2020
6
February, 2020
6
June, 2020
6
May, 2021
5
January, 2020
4
May, 2022
3
August, 2017
3
October, 2022
2
January, 2021
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
May, 2020
1
October, 2019
Available data
285
bed bed3+
72
bed bed9
18
bigWig
14
tsv
3
bigBed bed9
1
bed bed9+
Organism
381
Homo sapiens
Biosample type
302
tissue
60
primary cell
17
cell line
2
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
367
AMP
12
ENCODE
2
T1D
Genome assembly (visualization)
373
hg19
98
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
381 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 17 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
skeletal muscle cell
2
1
1
1
+ See 9 more…
cell line
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
in vitro differentiated cells
myotube
1
1
See all biosamples
Download