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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
66
accessible chromatin
49
gene expression
47
target gene predictions
33
differential activity
29
candidate regulatory elements
19
chromatin state
16
eQTL
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
50
September, 2022
47
March, 2023
34
May, 2021
33
February, 2021
20
January, 2021
19
February, 2024
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
October, 2019
5
January, 2022
5
June, 2020
4
January, 2020
3
August, 2017
2
February, 2020
2
May, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
157
bed bed3+
77
tsv
53
bigWig
15
bed bed9
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
279
Homo sapiens
Biosample type
124
tissue
119
primary cell
33
cell line
3
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
239
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
186
hg19
64
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
279 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
3
13
1
2
2
2
2
body of pancreas
2
5
8
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
breast epithelium
1
3
5
2
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
2
1
pancreatic beta cell
8
3
3
3
pancreatic alpha cell
7
3
3
3
pancreatic acinar cell
6
3
3
3
pancreatic delta cell
5
3
4
3
+ See 12 more…
cell line
EndoC_BH1
8
8
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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