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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
284
gene expression
243
candidate regulatory elements
238
accessible chromatin
188
target gene predictions
121
chromatin state
94
differential activity
variant allelic effects
47
binding sites
33
histone modifications
5
eQTL
2
caQTL
Date released
349
September, 2022
299
February, 2021
160
September, 2023
128
November, 2021
50
February, 2024
38
March, 2023
35
August, 2021
34
May, 2021
33
June, 2020
20
January, 2020
20
January, 2021
15
November, 2022
12
February, 2023
10
February, 2020
9
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
4
March, 2024
4
May, 2020
3
August, 2017
2
May, 2022
1
April, 2019
1
January, 2022
1
July, 2020
1
May, 2019
1
November, 2019
Available data
754
bed bed3+
357
tsv
191
bigWig
118
bed bed9
90
txt
10
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1255
Homo sapiens
Biosample type
802
primary cell
346
tissue
80
cell line
27
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
938
AMP
160
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
875
hg19
320
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
1255 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
1
2
hepatocyte
13
1
8
3
1
1
4
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
endothelial cell of umbilical vein
6
2
4
5
2
+ See 148 more…
tissue
kidney
7
29
10
14
16
1
2
1
right kidney
20
1
10
10
renal cortex interstitium
20
1
9
9
renal pelvis
19
2
9
9
left kidney
18
9
9
+ See 28 more…
cell line
EndoC_BH1
8
8
1
3
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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