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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
17
chromatin state
15
accessible chromatin
14
histone modifications
12
gene expression
8
eQTL
7
binding sites
3
Fine-mapped variants
3
differential activity
variant allelic effects
1
caQTL
Date released
46
September, 2022
February, 2024
26
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
83
bed bed3+
15
tsv
14
bed bed9
9
bigWig
1
bam
1
bigBed bed9
Organism
124
Homo sapiens
Biosample type
57
tissue
35
primary cell
28
cell line
4
in vitro differentiated cells
Organ
858
epithelium
635
kidney
448
brain
433
connective tissue
355
musculature of body
310
lung
283
intestine
247
pancreas
240
heart
236
limb
236
vasculature
203
skin of body
190
bodily fluid
180
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
124
liver
117
stomach
106
eye
89
bone element
86
mammary gland
84
adipose tissue
84
small intestine
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
23
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
119
AMP
5
ENCODE
Genome assembly (visualization)
106
hg19
36
GRCh38
2
hg18
annotation_type!
variant allelic effects
month_released!
February, 2024
BIOSAMPLE
TYPE
124 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
differential activity
caQTL
tissue
liver
13
10
9
4
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
3
1
3
4
8
1
hepatic stellate cell
1
1
1
3
1
1
pancreatic endothelial cell
1
3
endothelial cell of hepatic sinusoid
2
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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