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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
222
accessible chromatin
139
target gene predictions
120
candidate regulatory elements
93
differential activity
68
chromatin state
49
binding sites
variant allelic effects
38
histone modifications
11
eQTL
3
Fine-mapped variants
3
caQTL
Date released
215
February, 2021
191
September, 2022
155
September, 2023
128
November, 2021
51
February, 2024
38
March, 2023
36
May, 2021
30
August, 2021
29
June, 2020
20
January, 2021
16
January, 2020
15
November, 2022
12
February, 2023
12
March, 2020
11
February, 2020
7
April, 2020
7
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
May, 2022
2
March, 2024
2
November, 2019
1
January, 2022
1
July, 2020
1
May, 2020
1
September, 2018
Available data
575
bed bed3+
332
tsv
177
bigWig
78
txt
62
bed bed9
10
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1002
Homo sapiens
Biosample type
788
primary cell
119
tissue
69
cell line
26
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
442
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
690
AMP
155
KPMP
128
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
649
hg19
260
GRCh38
2
hg18
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
1002 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
1
1
2
hepatocyte
13
8
3
1
1
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
endothelial cell of umbilical vein
2
4
6
5
2
+ See 141 more…
tissue
liver
1
4
10
13
1
9
1
2
7
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
right lobe of liver
1
1
2
1
1
3
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
keratinocyte
3
1
HuH-7.5
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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