Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
16
target gene predictions
15
chromatin state
12
binding sites
5
histone modifications
4
accessible chromatin
variant allelic effects
Date released
42
September, 2022
28
February, 2021
4
June, 2020
3
October, 2022
2
May, 2021
1
August, 2017
Available data
66
bed bed3+
14
bed bed9
Organism
80
Homo sapiens
Biosample type
39
primary cell
36
cell line
3
in vitro differentiated cells
2
tissue
Organ
597
epithelium
493
kidney
449
brain
368
connective tissue
357
musculature of body
298
lung
267
intestine
236
limb
235
heart
226
pancreas
218
bodily fluid
213
embryo
207
blood
207
vasculature
193
skin of body
170
blood vessel
168
large intestine
147
liver
143
extraembryonic component
108
stomach
103
eye
86
adipose tissue
86
bone element
81
uterus
80
mammary gland
80
small intestine
77
prostate gland
71
placenta
66
artery
64
penis
62
adrenal gland
62
lymph node
61
ureter
48
gonad
48
thymus
43
spinal cord
39
esophagus
34
spleen
26
testis
24
lymphoid tissue
23
nerve
22
vein
21
ovary
20
thyroid gland
19
mouth
18
skeleton
13
breast
13
pituitary gland
12
bronchus
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
80
AMP
6
ENCODE
Genome assembly (visualization)
80
hg19
14
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
80 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
primary cell
mammary epithelial cell
3
1
1
4
1
mammary gland epithelial cell
3
3
3
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
1
1
cell line
MCF-7
9
6
5
3
2
1
T47D
3
2
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
Download