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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
histone modifications
811
binding sites
674
gene expression
521
accessible chromatin
167
differential activity
140
variant allelic effects
75
chromatin state
45
eQTL
6
caQTL
5
hQTL
5
sQTL
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
representative DNase hypersensitivity sites
Date released
1738
February, 2021
1671
September, 2022
289
June, 2020
286
September, 2023
262
May, 2021
162
February, 2024
144
May, 2020
99
October, 2022
94
August, 2021
68
March, 2023
56
January, 2021
56
March, 2020
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
26
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
4250
bed bed3+
791
tsv
164
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
5156
Homo sapiens
Biosample type
1825
tissue
1642
primary cell
1407
cell line
323
in vitro differentiated cells
4
stem cell
Organ
691
epithelium
541
kidney
313
connective tissue
272
musculature of body
266
brain
227
lung
208
pancreas
202
intestine
172
vasculature
164
limb
156
heart
144
skin of body
140
bodily fluid
132
blood
126
large intestine
125
blood vessel
124
embryo
104
extraembryonic component
89
eye
89
liver
85
stomach
65
adipose tissue
62
mammary gland
60
bone element
60
small intestine
57
prostate gland
51
placenta
50
lymph node
49
penis
48
adrenal gland
48
ureter
43
artery
36
gonad
36
thymus
31
esophagus
30
spinal cord
26
spleen
23
uterus
19
testis
17
lymphoid tissue
17
vein
16
ovary
16
thyroid gland
15
lymphatic vessel
14
mouth
14
nerve
11
bronchus
11
pituitary gland
10
breast
9
bone marrow
8
tongue
8
urinary bladder
7
skeleton
7
vagina
3
nose
3
trachea
1
pericardium
Project
4830
AMP
281
KPMP
57
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5986
hg19
GRCh38
4
hg18
annotation_type!
variant to gene
representative DNase hypersensitivity sites
histone modifications
assembly!
GRCh38
BIOSAMPLE
TYPE
5203 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
gene expression
accessible chromatin
differential activity
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
tissue
heart
37
20
1
3
2
2
stomach
40
21
1
3
kidney
29
14
1
7
1
1
1
lung
33
17
1
muscle of arm
33
16
1
+ See 193 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
2
3
monocyte
2
1
15
5
1
2
1
1
CD14-positive monocyte
8
19
CD4-positive, alpha-beta memory T cell
14
9
+ See 363 more…
cell line
A549
21
19
2
1
EndoC_BH1
1
1
8
7
3
1
MCF-7
9
6
3
1
K562
7
7
2
1
1
H1-hESC
1
2
2
8
1
+ See 636 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
neural progenitor cell
5
5
7
embryonic stem cell
1
1
6
5
cardiomyocytes
11
+ See 96 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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