Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
499
gene expression
377
chromatin state
162
differential activity
51
eQTL
5
variant allelic effects
3
accessible chromatin
3
sQTL
2
hQTL
1
meQTL
Date released
339
September, 2022
281
September, 2023
123
February, 2021
85
May, 2021
64
March, 2023
49
February, 2024
45
January, 2022
34
August, 2021
34
May, 2022
16
February, 2020
9
August, 2018
7
March, 2020
5
May, 2020
2
January, 2020
2
March, 2024
2
May, 2024
2
October, 2019
1
February, 2023
1
July, 2020
1
June, 2020
1
November, 2020
Available data
bed bed3+
613
tsv
414
bigWig
343
bed bed9
108
txt
34
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1103
Homo sapiens
Biosample type
876
primary cell
tissue
227
cell line
in vitro differentiated cells
Organ
386
epithelium
267
kidney
78
connective tissue
70
pancreas
66
vasculature
44
blood vessel
31
skin of body
28
liver
27
lung
25
bodily fluid
23
blood
22
embryo
15
brain
14
mammary gland
12
bone element
12
musculature of body
11
prostate gland
10
artery
10
penis
9
extraembryonic component
8
heart
8
lymph node
7
lymphatic vessel
5
vein
4
eye
4
intestine
4
large intestine
3
uterus
2
bone marrow
2
bronchus
2
gonad
2
mouth
2
placenta
2
testis
1
adipose tissue
1
esophagus
1
limb
1
lymphoid tissue
1
pericardium
1
spinal cord
Project
811
AMP
281
KPMP
11
community
Genome assembly (visualization)
400
hg19
397
GRCh38
annotation_type!
variant to gene
files.file_type!
bed bed3+
biosample_type!
in vitro differentiated cells
tissue
BIOSAMPLE
TYPE
1103 results
search-icon
table-tab-icon
Clear Filters
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
accessible chromatin
sQTL
hQTL
meQTL
primary cell
monocyte
15
4
1
1
epithelial cell of proximal tubule
16
1
glomerular endothelial cell
14
1
1
hepatocyte
13
1
common myeloid progenitor, CD34-positive
13
+ See 254 more…
cell line
A549
18
EndoC_BH1
8
3
H1-hESC
8
1
induced pluripotent stem cell
7
K562
6
+ See 152 more…
See all biosamples
Download