Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
target gene predictions
49
candidate regulatory elements
48
binding sites
30
chromatin state
25
histone modifications
13
accessible chromatin
2
eQTL
1
gene expression
Date released
77
February, 2021
75
September, 2022
28
February, 2024
20
October, 2022
13
June, 2020
5
May, 2021
3
August, 2017
2
August, 2021
2
January, 2020
May, 2020
1
March, 2020
1
March, 2024
Available data
197
bed bed3+
27
bed bed9
2
bigBed bed9
1
tsv
Organism
227
Homo sapiens
Biosample type
197
cell line
27
primary cell
3
tissue
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
269
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
227
AMP
Genome assembly (visualization)
226
hg19
55
GRCh38
annotation_type!
variant to gene
month_released!
May, 2020
BIOSAMPLE
TYPE
227 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 24 more…
primary cell
endothelial cell of umbilical vein
4
6
2
5
1
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
tissue
blood
2
whole blood
1
See all biosamples
Download